STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711295_00163Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_000711295_00471
Unannotated protein.
    
 
 0.937
GCA_000711295_00482
Unannotated protein.
    
 
 0.929
GCA_000711295_01294
Unannotated protein.
    
 
 0.928
GCA_000711295_03147
Unannotated protein.
 
 
 
 0.928
GCA_000711295_00211
Unannotated protein.
   
   0.925
GCA_000711295_00483
Unannotated protein.
    
 
 0.925
GCA_000711295_00493
Unannotated protein.
  
 
   0.925
GCA_000711295_02825
Unannotated protein.
    
 
 0.924
GCA_000711295_00487
Unannotated protein.
    
 
 0.921
GCA_000711295_01210
Unannotated protein.
   
   0.921
Your Current Organism:
Desulfohalovibrio reitneri
NCBI taxonomy Id: 1307759
Other names: D. reitneri, DSM 26903, Desulfohalovibrio reitneri Spring et al. 2019, Desulfovibrio sp. L21-Syr-AB, JCM 18662, strain L21-Syr-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.