STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711295_00252Unannotated protein. (575 aa)    
Predicted Functional Partners:
GCA_000711295_02039
Unannotated protein.
    
 0.751
GCA_000711295_01060
Unannotated protein.
  
  
 0.730
GCA_000711295_02445
Unannotated protein.
   
 
 0.686
GCA_000711295_01167
Unannotated protein.
    
  0.665
GCA_000711295_02877
Unannotated protein.
     
 0.663
GCA_000711295_02375
Unannotated protein.
    
 0.656
GCA_000711295_02738
Unannotated protein.
    
 0.656
GCA_000711295_01580
Unannotated protein.
    
  0.653
GCA_000711295_01519
Unannotated protein.
    
  0.652
GCA_000711295_01828
Unannotated protein.
   
 
 0.625
Your Current Organism:
Desulfohalovibrio reitneri
NCBI taxonomy Id: 1307759
Other names: D. reitneri, DSM 26903, Desulfohalovibrio reitneri Spring et al. 2019, Desulfovibrio sp. L21-Syr-AB, JCM 18662, strain L21-Syr-AB
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.