STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711295_00747Unannotated protein. (138 aa)    
Predicted Functional Partners:
GCA_000711295_00748
Unannotated protein.
       0.805
GCA_000711295_00749
Unannotated protein.
       0.805
GCA_000711295_00746
Unannotated protein.
       0.801
GCA_000711295_00744
Unannotated protein.
       0.713
GCA_000711295_00745
Unannotated protein.
       0.711
GCA_000711295_00750
Unannotated protein.
       0.688
GCA_000711295_00751
Unannotated protein.
       0.675
GCA_000711295_00752
Unannotated protein.
       0.675
GCA_000711295_00753
Unannotated protein.
       0.675
GCA_000711295_00754
Unannotated protein.
       0.675
Your Current Organism:
Desulfohalovibrio reitneri
NCBI taxonomy Id: 1307759
Other names: D. reitneri, DSM 26903, Desulfohalovibrio reitneri Spring et al. 2019, Desulfovibrio sp. L21-Syr-AB, JCM 18662, strain L21-Syr-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.