Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13487.1Beta-hexosaminidase. (422 aa)    
Predicted Functional Partners:
AHC13488.1
Dehydrogenase; Related to short-chain alcohol dehydrogenases; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.682
AHC14050.1
Hypothetical protein.
  
  
 0.467
AHC14804.1
TolA protein.
  
  
 0.467
AHC15393.1
Putative beta-lactamase class C.
 
  
 0.438
AHC13486.1
Phytol kinase.
       0.430
AHC13489.1
NAD(P) transhydrogenase alpha subunit.
     
 0.424
AHC13490.1
NAD(P) transhydrogenase alpha subunit.
     
 0.419
AHC13491.1
NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.406
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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