Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13507.1Oxidoreductase, short-chain dehydrogenase/reductase family. (241 aa)    
Predicted Functional Partners:
AHC13822.1
Dehydrogenase; Related to short-chain alcohol dehydrogenases.
 
 
 0.785
AHC13851.1
Short chain dehydrogenase.
 
 
 0.782
AHC13488.1
Dehydrogenase; Related to short-chain alcohol dehydrogenases; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.773
AHC13989.1
Putative oxidoreductase/Short-chain dehydrogenase.
 
 
 0.745
AHC16755.1
Acyl-CoA synthetase, AMP-(fatty) acid ligase.
  
 
 0.619
AHC13508.1
Anti-sigma F factor antagonist, Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
       0.552
AHC13506.1
Hypothetical protein.
       0.551
AHC13505.1
Hypothetical protein.
       0.461
AHC13509.1
Hypothetical protein.
       0.445
AHC16488.1
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
   
 
 0.442
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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