STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13546.1Putative glycogen debranching enzyme, archaeal type, TIGR01561. (898 aa)    
Predicted Functional Partners:
AHC16557.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.766
AHC13544.1
PTS system, fructose-specific IIABC component.
       0.645
AHC13545.1
Putative Na(+)/H(+) antiporter.
       0.645
AHC13547.1
Trehalose synthase.
   
 
 0.548
AHC15530.1
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.527
AHC13542.1
Hypothetical protein.
       0.426
AHC13543.1
Hypothetical protein.
       0.426
AHC16151.1
Alpha-amylase.
 
  
 0.423
AHC16298.1
Hypothetical protein.
  
  
 0.423
AHC16786.1
1,4-alpha-glucan branching enzyme.
 
  
 0.423
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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