STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13559.1ABC transporter, ATP-binding protein. (328 aa)    
Predicted Functional Partners:
AHC13560.1
Putative integral membrane protein.
 
  
 0.970
AHC13561.1
ABC-type multidrug transport system, permease component.
 
  
 0.967
AHC15343.1
Branched-chain amino acid transport ATP-binding protein LivF.
 
     
0.899
AHC14061.1
Branched-chain amino acid transport ATP-binding protein LivF.
 
     
0.857
AHC15512.1
L-proline glycine betaine ABC transport system permease protein ProV.
 
     
0.733
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
0.645
AHC15052.1
ATPase component of general energizing module of ECF transporter.
 
    
0.487
AHC15977.1
Glutamate transport ATP-binding protein.
 
     
0.486
AHC15921.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
  
     0.484
AHC13562.1
methylated-DNA--protein-cysteine methyltransferase-related protein.
       0.473
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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