STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13612.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
AHC13611.1
Hypothetical protein.
       0.807
AHC15283.1
N-acetylmuramoyl-L-alanine amidase.
    
   0.642
AHC13753.1
ABC transporter, ATP-binding protein.
   
 
 0.615
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
 0.615
AHC14474.1
ABC transporter, ATP-binding protein.
   
 
 0.615
AHC15581.1
ABC transporter, ATP-binding protein.
   
 
 0.615
AHC13613.1
Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.608
AHC13609.1
ATP-dependent DNA helicase UvrD/PcrA.
       0.570
AHC14253.1
Lipoprotein releasing system transmembrane protein LolC.
   
 
 0.525
AHC13754.1
Hypothetical protein.
   
 
 0.524
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.