Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AHC13617.1SAM-dependent methyltransferase UbiG. (311 aa)    
Predicted Functional Partners:
AHC16535.1
Hypothetical protein.
 
  
 0.647
AHC13618.1
4-alpha-glucanotransferase (amylomaltase).
       0.618
AHC14219.1
Putative CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.590
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.561
AHC15273.1
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.546
AHC16807.1
Multifunctional octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.546
AHC15195.1
Anti-sigma-factor antagonist.
 
    0.474
AHC16704.1
Arsenical-resistance protein ACR3.
  
  
 0.472
AHC15332.1
Hypothetical protein.
  
  
 0.428
AHC16030.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.424
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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