STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13617.1SAM-dependent methyltransferase UbiG. (311 aa)    
Predicted Functional Partners:
AHC13618.1
4-alpha-glucanotransferase (amylomaltase).
       0.618
AHC16535.1
Hypothetical protein.
 
  
 0.616
AHC14219.1
Putative CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.571
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.553
AHC14681.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.509
AHC13631.1
Transporter.
  
  
 0.500
AHC15195.1
Anti-sigma-factor antagonist.
 
    0.472
AHC16537.1
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
   
 0.471
AHC15802.1
Thioredoxin reductase.
  
  
 0.467
AHC16704.1
Arsenical-resistance protein ACR3.
  
  
 0.455
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.