STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13704.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
AHC14152.1
Hypothetical protein.
  
     0.775
AHC13702.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
    0.774
AHC13703.1
Sugar transporter.
       0.773
AHC13705.1
Hypothetical protein.
       0.584
AHC13707.1
Hypothetical protein.
       0.584
AHC13706.1
Hypothetical protein.
       0.570
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.509
AHC13700.1
Hypothetical protein.
       0.479
AHC14633.1
TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA.
  
 
 0.406
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.