STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13706.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
AHC15279.1
Positive regulator of CheA protein activity (CheW).
  
  
 0.950
AHC13707.1
Hypothetical protein.
 
     0.940
AHC13705.1
Hypothetical protein.
 
     0.938
AHC14969.1
Ammonium transporter.
  
 
 0.884
AHC16669.1
Signal transduction histidine kinase.
 
 
 0.850
AHC16321.1
Sensory transduction regulatory protein.
 
 
 0.849
AHC14262.1
Sensor protein.
 
 
 0.831
AHC15101.1
Signal transduction histidine kinase CheA.
  
 
 0.825
AHC15280.1
Signal transduction histidine kinase CheA.
  
 
 0.825
AHC15886.1
Signal transduction histidine kinase CheA.
  
 
 0.825
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.