STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rexRedox-sensitive transcriptional regulator, AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (216 aa)    
Predicted Functional Partners:
AHC13710.1
Anti-sigma B factor RsbT.
     
 0.785
AHC13709.1
DRTGG domain-containing protein.
       0.783
AHC13711.1
DRTGG domain-containing protein.
       0.783
AHC13708.1
Putative metal-dependent phosphoesterases (PHP family).
       0.723
AHC13452.1
Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.711
AHC13718.1
Periplasmic [Fe] hydrogenase large subunit.
  
  
 0.513
rpsP
SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.461
AHC13713.1
Hypothetical protein.
       0.452
AHC15730.1
Multifunctional fatty acid oxidation complex subunit alpha.
     
 0.440
AHC13717.1
NAD-reducing hydrogenase subunit HoxF.
  
    0.431
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.