Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13715.1Sensory transduction histidine kinase. (176 aa)    
Predicted Functional Partners:
AHC13716.1
NADP-reducing hydrogenase, subunit B.
 
   
 0.947
AHC15332.1
Hypothetical protein.
 
 
 0.889
AHC13710.1
Anti-sigma B factor RsbT.
 
  
 0.852
AHC13717.1
NAD-reducing hydrogenase subunit HoxF.
 
  
 0.848
AHC13708.1
Putative metal-dependent phosphoesterases (PHP family).
 
   
 0.841
AHC13709.1
DRTGG domain-containing protein.
 
     0.840
AHC13711.1
DRTGG domain-containing protein.
 
     0.840
AHC13718.1
Periplasmic [Fe] hydrogenase large subunit.
  
  
 0.763
AHC14706.1
Hypothetical protein.
 
 
 0.742
AHC13714.1
NAD-reducing hydrogenase subunit HoxE.
 
   
 0.690
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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