Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13727.1Flagellar biosynthesis protein FliS. (116 aa)    
Predicted Functional Partners:
AHC14629.1
Flagellar hook-associated protein FlgK.
 
 
 0.988
AHC13578.1
Hypothetical protein.
  
 
 0.980
AHC14643.1
Flagellin protein FlaA; Component of the core of the flagella. Belongs to the bacterial flagellin family.
 
 
 0.968
AHC14630.1
Flagellar hook-associated protein FlgL.
 
 
 0.966
AHC14639.1
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.966
AHC15133.1
Flagellin protein FlaA; Component of the core of the flagella. Belongs to the bacterial flagellin family.
 
 
 0.966
AHC15279.1
Positive regulator of CheA protein activity (CheW).
  
  
 0.966
AHC14641.1
Flagellin protein FlaA; Component of the core of the flagella. Belongs to the bacterial flagellin family.
 
 
 0.965
AHC15910.1
Chemotaxis protein methyltransferase CheR.
  
  
 0.961
AHC14578.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.955
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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