STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13737.1Thioesterase superfamily. (143 aa)    
Predicted Functional Partners:
AHC13736.1
ADP-ribose pyrophosphatase.
       0.783
AHC13845.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.634
AHC16143.1
Hypothetical protein.
 
     0.618
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.578
AHC13734.1
Hypothetical protein.
       0.566
AHC13735.1
Putative regulator protein.
       0.566
AHC13733.1
Serine acetyltransferase.
  
    0.497
AHC14605.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
    
   0.495
AHC14367.1
Putative hemolysin.
  
     0.491
AHC15591.1
Putative hemolysin.
  
     0.491
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.