STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13754.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
AHC13753.1
ABC transporter, ATP-binding protein.
 
 
 0.983
AHC14474.1
ABC transporter, ATP-binding protein.
 
 
 0.929
AHC15581.1
ABC transporter, ATP-binding protein.
 
 
 0.920
AHC13756.1
Hypothetical protein.
 
 
 
 0.867
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 0.814
AHC16474.1
ABC transporter associated permease.
 
     0.767
AHC13755.1
ABC transporter, permease protein, putative.
 
    
0.754
AHC15900.1
ABC transporter, permease protein.
  
     0.738
AHC16473.1
Hypothetical protein.
 
 
 
 0.721
AHC14473.1
Membrane-fusion protein.
 
 
 0.708
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.