Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AHC13772.1Hydrolase, alpha/beta fold family. (282 aa)    
Predicted Functional Partners:
AHC13771.1
Nitroreductase.
  
  
 0.787
AHC15669.1
Acyl-CoA dehydrogenase.
  
 0.585
AHC15731.1
Butyryl-CoA dehydrogenase.
  
 0.585
AHC15757.1
Hypothetical protein.
  
 
 0.585
AHC16384.1
Hypothetical protein.
    
 0.577
trpS
Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
      0.567
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.553
AHC13770.1
Hypothetical protein.
       0.543
AHC14964.1
Hypothetical protein.
  
 0.405
AHC15300.1
Ankyrin.
  
 0.405
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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