Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13807.1Ferric iron ABC transporter, iron-binding protein. (275 aa)    
Predicted Functional Partners:
AHC13808.1
Hypothetical protein.
 
 
 0.995
AHC13809.1
Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 
 0.964
AHC14169.1
Ferric iron ABC transporter, permease protein.
  
 
 0.934
AHC14168.1
Ferric iron ABC transporter, iron-binding protein.
     
  0.900
AHC14170.1
Ferric iron ABC transporter, ATP-binding protein.
 
 
 0.872
AHC15744.1
Autolysin sensor kinase.
   
   0.663
AHC14408.1
Hypothetical protein.
  
  
 0.662
AHC14593.1
Hypothetical protein.
    
   0.480
AHC14592.1
Flagellar motor rotation protein MotB.
   
   0.476
AHC16170.1
Outer membrane protein.
   
   0.476
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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