STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC13842.1Phosphate acetyltransferase. (301 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 0.973
buk
Butyrate kinase; Belongs to the acetokinase family.
  
 0.965
buk-2
Butyrate kinase; Belongs to the acetokinase family.
  
 0.955
AHC13844.1
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.751
AHC13843.1
Hypothetical protein.
       0.741
AHC13973.1
Alcohol dehydrogenase/ Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 
 0.682
AHC15895.1
Isocitrate lyase, group III, Mycobacterial type ICL2.
   
  
 0.675
AHC15896.1
Malate synthase.
  
  
 0.649
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.634
AHC13845.1
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.597
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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