Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13861.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (699 aa)    
Predicted Functional Partners:
AHC16043.1
Hypothetical protein.
 
 0.930
AHC14120.1
Hypothetical protein.
    
 0.906
AHC15332.1
Hypothetical protein.
 
  
 0.887
AHC15910.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.861
AHC14886.1
Hypothetical protein.
 
 
 0.836
AHC16539.1
GGDEF domain protein.
 
 
 0.836
AHC14969.1
Ammonium transporter.
 
  
 0.834
AHC15522.1
Hypothetical protein.
 
  
 0.811
AHC15486.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
0.797
AHC14710.1
Ammonium transporter.
 
      0.796
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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