Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC13902.1Sensory box histidine kinase. (553 aa)    
Predicted Functional Partners:
AHC13900.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.895
AHC15333.1
Hypothetical protein.
 
 
 0.878
AHC14775.1
Two-component response regulator SA14-24.
 
 
 0.835
AHC14333.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.821
AHC13471.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.819
AHC15332.1
Hypothetical protein.
 
 
0.796
AHC14271.1
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.793
AHC16615.1
Hypothetical protein.
  
 
 0.793
AHC16392.1
Two-component response regulator.
  
 
 
 0.790
AHC14853.1
Response regulator.
 
 
 0.788
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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