| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHC14320.1 | prfC | L21SP2_0900 | L21SP2_0488 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.777 |
| AHC14320.1 | rplB | L21SP2_0900 | L21SP2_0880 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L2p (L8e); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.992 |
| AHC14320.1 | rplI | L21SP2_0900 | L21SP2_1320 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L9p; Binds to the 23S rRNA. | 0.989 |
| AHC14320.1 | rplL | L21SP2_0900 | L21SP2_2705 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.991 |
| AHC14320.1 | rplM | L21SP2_0900 | L21SP2_0161 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.990 |
| AHC14320.1 | rplS | L21SP2_0900 | L21SP2_1744 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.989 |
| AHC14320.1 | rplT | L21SP2_0900 | L21SP2_1248 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.988 |
| AHC14320.1 | rplU | L21SP2_0900 | L21SP2_1437 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.986 |
| AHC14320.1 | rpmA | L21SP2_0900 | L21SP2_1439 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. | 0.986 |
| AHC14320.1 | rpmG | L21SP2_0900 | L21SP2_0048 | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | LSU ribosomal protein L33p, zinc-independent; Belongs to the bacterial ribosomal protein bL33 family. | 0.984 |
| prfC | AHC14320.1 | L21SP2_0488 | L21SP2_0900 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family. | 0.777 |
| prfC | rplB | L21SP2_0488 | L21SP2_0880 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L2p (L8e); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.733 |
| prfC | rplI | L21SP2_0488 | L21SP2_1320 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L9p; Binds to the 23S rRNA. | 0.773 |
| prfC | rplL | L21SP2_0488 | L21SP2_2705 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.779 |
| prfC | rplM | L21SP2_0488 | L21SP2_0161 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.785 |
| prfC | rplS | L21SP2_0488 | L21SP2_1744 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.823 |
| prfC | rplT | L21SP2_0488 | L21SP2_1248 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.795 |
| prfC | rplU | L21SP2_0488 | L21SP2_1437 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.740 |
| prfC | rpmA | L21SP2_0488 | L21SP2_1439 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. | 0.863 |
| prfC | rpmG | L21SP2_0488 | L21SP2_0048 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | LSU ribosomal protein L33p, zinc-independent; Belongs to the bacterial ribosomal protein bL33 family. | 0.826 |
