STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14037.1Hemin uptake system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (361 aa)    
Predicted Functional Partners:
AHC14036.1
Vitamin B12 ABC transporter, ATPase component BtuD.
 
 0.988
AHC14034.1
Hypothetical protein.
 
 
 0.961
AHC15429.1
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
 
 0.952
AHC15430.1
Vitamin B12 ABC transporter, B12-binding component BtuF.
 
 
 0.932
AHC16204.1
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
 
 0.930
AHC13815.1
iron(III) ABC transporter, ATP-binding protein.
 
 0.925
AHC14026.1
ABC-type Fe3+-siderophore transport system, ATPase component.
 
 0.915
AHC16206.1
Vitamin B12 ABC transporter, B12-binding component BtuF.
 
 
 0.884
AHC16084.1
Hypothetical protein.
 
 0.883
AHC13936.1
iron(III) dicitrate-binding protein.
 
 
 0.800
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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