Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14038.1Flavodoxin. (177 aa)    
Predicted Functional Partners:
AHC14035.1
Putative radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent.
 
   
 0.885
AHC14037.1
Hemin uptake system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.809
AHC14036.1
Vitamin B12 ABC transporter, ATPase component BtuD.
  
  
 0.802
AHC14034.1
Hypothetical protein.
 
  
 0.760
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.523
AHC14039.1
Transmembrane component of energizing module of ECF transporter.
       0.474
AHC14033.1
Hypothetical protein.
       0.425
AHC14040.1
ATPase component of energizing module of ECF transporter.
       0.423
AHC14863.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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