Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14076.1Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline. (195 aa)    
Predicted Functional Partners:
AHC13668.1
Histone deacetylase family protein.
    
   0.757
AHC14400.1
Hypothetical protein.
    
   0.755
AHC13572.1
Peptidyl-prolyl cis-trans isomerase.
   
   0.754
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.742
AHC14444.1
Hypothetical protein.
  
   0.728
AHC14722.1
Hypothetical protein.
   
   0.704
AHC15995.1
Hypothetical protein.
   
   0.704
AHC14964.1
Hypothetical protein.
   
 
 0.673
AHC15300.1
Ankyrin.
   
 
 0.673
AHC14343.1
Hypothetical protein.
   
   0.609
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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