Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AHC14130.1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (339 aa)    
Predicted Functional Partners:
AHC14129.1
Oligopeptide transport system permease protein OppB.
 0.991
AHC15827.1
Dipeptide transport system permease protein DppC.
 
 0.990
AHC16399.1
Oligopeptide transport system permease protein OppC.
 
 0.990
AHC14485.1
(GlcNAc)2 ABC transporter, permease component 2.
 
 0.989
AHC14128.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
 0.984
AHC14131.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
  
 
0.980
AHC16276.1
Hypothetical protein.
 
 
 0.906
AHC15831.1
Dipeptide transport system permease protein DppB.
 
 0.903
pstB
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
AHC16400.1
Oligopeptide transport system permease protein OppB.
 
 0.894
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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