STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14139.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
AHC14140.1
Hypothetical protein.
       0.794
AHC14141.1
Hypothetical protein.
       0.773
AHC14138.1
Hypothetical protein.
       0.568
AHC14135.1
Putative cysteine protease.
       0.453
AHC14136.1
Hypothetical protein.
       0.452
AHC14137.1
Methanol dehydrogenase regulatory protein.
       0.438
AHC16069.1
Low molecular weight protein tyrosine phosphatase.
  
  
 0.406
AHC16705.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.406
AHC15543.1
Hypothetical protein.
  
    0.400
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.