STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14170.1Ferric iron ABC transporter, ATP-binding protein. (382 aa)    
Predicted Functional Partners:
AHC14169.1
Ferric iron ABC transporter, permease protein.
 
 0.991
AHC14168.1
Ferric iron ABC transporter, iron-binding protein.
 
 
 0.981
AHC13808.1
Hypothetical protein.
 
 0.951
AHC13809.1
Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
  
  
 
0.917
AHC16277.1
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
    
0.910
AHC13807.1
Ferric iron ABC transporter, iron-binding protein.
 
 
 0.895
AHC15827.1
Dipeptide transport system permease protein DppC.
 
    0.858
AHC15681.1
Hypothetical protein.
 
  
 0.848
AHC15680.1
Putative ABC-transporter transport protein.
 
 
 0.845
AHC14476.1
ABC transporter permease protein.
 
 
    0.611
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (20%) [HD]