Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14186.1Putative beta-xyloside ABC transporter, permease component. (306 aa)    
Predicted Functional Partners:
AHC14188.1
Xylose ABC transporter, permease component.
 
 
 0.989
AHC14189.1
Polysaccharide ABC transporter substrate-binding protein.
 
 
 0.986
AHC14182.1
Sugar ABC transporter, permease protein.
  
 
 
0.924
AHC14187.1
Hypothetical protein.
       0.762
AHC14183.1
Putative alpha-xyloside ABC transporter, permease component.
 
  
 0.686
AHC13955.1
Acetyl xylan esterase 1, Cephalosporin-C deacetylase.
 
     0.636
AHC15872.1
Putative chitobiose ABC transport system, permease protein 2.
 
  
 0.601
AHC13961.1
ABC-type sugar transport system, permease component.
 
  
 0.582
AHC13962.1
Alpha-mannosidase.
 
   
 0.564
AHC16430.1
Sugar ABC transporter (permease).
 
  
 0.555
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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