Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AHC14189.1Polysaccharide ABC transporter substrate-binding protein. (542 aa)    
Predicted Functional Partners:
AHC14188.1
Xylose ABC transporter, permease component.
 
 0.992
AHC14186.1
Putative beta-xyloside ABC transporter, permease component.
 
 
 0.986
AHC13653.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.820
AHC16106.1
Transcriptional regulator, AraC family.
 
   
 0.692
AHC14187.1
Hypothetical protein.
       0.686
AHC13960.1
Sugar ABC transporter, permease protein.
  
 
 0.593
AHC14182.1
Sugar ABC transporter, permease protein.
  
 
 0.593
AHC15554.1
Maltose/maltodextrin ABC transporter, permease protein MalF.
  
 
 0.593
AHC15843.1
Maltose/maltodextrin ABC transporter, permease protein MalF.
  
 
 0.593
AHC15873.1
Putative alpha-xyloside ABC transporter, permease component.
  
 
 0.593
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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