STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14237.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AHC15334.1
Phosphoglucomutase (femD).
  
     0.653
AHC16621.1
Dihydroxyacetone kinase family protein.
  
  
 0.643
AHC14236.1
Hypothetical protein.
       0.572
AHC14238.1
Integral membrane protein.
       0.572
AHC14256.1
Nucleotide excision repair protein.
  
     0.561
AHC16829.1
Trehalase.
  
     0.557
AHC14537.1
Uracil phosphoribosyltransferase.
 
    0.538
AHC14239.1
Hypothetical protein.
       0.530
AHC14645.1
TPR domain protein, putative component of TonB system.
  
     0.528
AHC14257.1
Putative ATP:guanido phosphotransferase YacI.
  
     0.497
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.