STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14266.1Bacterial pre-peptidase C-terminal domain protein. (656 aa)    
Predicted Functional Partners:
AHC14267.1
RNA pseudouridylate synthase, group 1.
       0.773
AHC14268.1
Signal transduction response regulator.
       0.727
AHC14269.1
Hypothetical protein.
       0.642
AHC14265.1
Putative rRNA methylase.
       0.601
AHC14270.1
Hypothetical protein; Belongs to the 5'-nucleotidase family.
       0.582
AHC14271.1
PAS/PAC sensor hybrid histidine kinase.
       0.556
AHC14263.1
Ribosomal large subunit pseudouridine synthase D.
       0.421
AHC14264.1
Hypothetical protein.
       0.421
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.