STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14272.1Isocitrate dehydrogenase [NADP]. (487 aa)    
Predicted Functional Partners:
AHC16678.1
Aconitate hydratase.
 0.958
AHC16221.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.940
AHC14828.1
Glutamate synthase [NADPH] large chain.
  
 
 0.918
AHC15760.1
Isocitrate dehydrogenase (NADP); Belongs to the monomeric-type IDH family.
    
 0.910
AHC16146.1
2-oxoglutarate oxidoreductase, alpha subunit.
     
 0.909
AHC16147.1
2-oxoglutarate oxidoreductase, beta subunit.
   
 
 0.906
AHC13840.1
2-oxoglutarate oxidoreductase, gamma subunit.
     
 0.901
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
 0.873
AHC16046.1
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
  
  
 0.844
AHC16263.1
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.841
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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