Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHC13609.1 | AHC15618.1 | L21SP2_0165 | L21SP2_2257 | ATP-dependent DNA helicase UvrD/PcrA. | Hypothetical protein. | 0.734 |
| AHC13609.1 | polA | L21SP2_0165 | L21SP2_0290 | ATP-dependent DNA helicase UvrD/PcrA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.700 |
| AHC13609.1 | recA | L21SP2_0165 | L21SP2_1792 | ATP-dependent DNA helicase UvrD/PcrA. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.741 |
| AHC13609.1 | topA | L21SP2_0165 | L21SP2_0857 | ATP-dependent DNA helicase UvrD/PcrA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.757 |
| AHC13637.1 | AHC14571.1 | L21SP2_0193 | L21SP2_1168 | Single-stranded DNA-binding protein. | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | 0.590 |
| AHC13637.1 | AHC14716.1 | L21SP2_0193 | L21SP2_1317 | Single-stranded DNA-binding protein. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.915 |
| AHC13637.1 | AHC14828.1 | L21SP2_0193 | L21SP2_1431 | Single-stranded DNA-binding protein. | Glutamate synthase [NADPH] large chain. | 0.472 |
| AHC13637.1 | AHC15618.1 | L21SP2_0193 | L21SP2_2257 | Single-stranded DNA-binding protein. | Hypothetical protein. | 0.456 |
| AHC13637.1 | polA | L21SP2_0193 | L21SP2_0290 | Single-stranded DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.524 |
| AHC13637.1 | recA | L21SP2_0193 | L21SP2_1792 | Single-stranded DNA-binding protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.447 |
| AHC13637.1 | topA | L21SP2_0193 | L21SP2_0857 | Single-stranded DNA-binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.781 |
| AHC14571.1 | AHC13637.1 | L21SP2_1168 | L21SP2_0193 | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | Single-stranded DNA-binding protein. | 0.590 |
| AHC14571.1 | AHC14716.1 | L21SP2_1168 | L21SP2_1317 | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.513 |
| AHC14571.1 | recA | L21SP2_1168 | L21SP2_1792 | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.698 |
| AHC14571.1 | topA | L21SP2_1168 | L21SP2_0857 | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.829 |
| AHC14716.1 | AHC13637.1 | L21SP2_1317 | L21SP2_0193 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Single-stranded DNA-binding protein. | 0.915 |
| AHC14716.1 | AHC14571.1 | L21SP2_1317 | L21SP2_1168 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake. | 0.513 |
| AHC14716.1 | AHC14828.1 | L21SP2_1317 | L21SP2_1431 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Glutamate synthase [NADPH] large chain. | 0.472 |
| AHC14716.1 | AHC15618.1 | L21SP2_1317 | L21SP2_2257 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Hypothetical protein. | 0.456 |
| AHC14716.1 | polA | L21SP2_1317 | L21SP2_0290 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.634 |
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