STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14281.1Iron-sulfur cluster assembly ATPase protein SufC. (257 aa)    
Predicted Functional Partners:
AHC14282.1
Iron-sulfur cluster assembly protein SufB.
 
 0.999
AHC14283.1
Iron-sulfur cluster assembly protein SufD.
 
 0.999
AHC15058.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.995
AHC15059.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
  
 0.962
AHC14280.1
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
 
  
 0.889
AHC15816.1
Cysteine desulfurase.
  
 0.865
AHC16064.1
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
 
 
 0.811
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
      0.591
AHC14284.1
Ferredoxin, 2Fe-2S.
       0.537
AHC15802.1
Thioredoxin reductase.
  
  
 0.493
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.