STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14285.1PTS system, fructose-specific component IIA/ IIB/ IIC. (726 aa)    
Predicted Functional Partners:
AHC14279.1
NAD(P)H dehydrogenase, quinone.
  
 
 0.653
AHC16636.1
Ribosomal subunit interface protein, putative.
  
  
 0.604
AHC13710.1
Anti-sigma B factor RsbT.
 
     0.583
AHC15334.1
Phosphoglucomutase (femD).
 
  
 0.573
AHC14286.1
Hypothetical protein.
       0.566
AHC15617.1
Response regulatory protein.
  
 
 0.516
AHC15332.1
Hypothetical protein.
 
  
 0.497
AHC13973.1
Alcohol dehydrogenase/ Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.491
AHC16488.1
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
     
 0.486
AHC14287.1
TsaC protein; Belongs to the SUA5 family.
       0.458
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.