STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14341.1Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY. (409 aa)    
Predicted Functional Partners:
AHC14342.1
Response regulator of zinc sigma-54-dependent two-component system.
 
 0.975
AHC15333.1
Hypothetical protein.
 
 
 0.906
AHC16642.1
Chemotaxis protein methyltransferase CheR.
    
 0.887
AHC15617.1
Response regulatory protein.
 
 
 
 0.878
AHC14775.1
Two-component response regulator SA14-24.
 
 
 
 0.852
AHC14120.1
Hypothetical protein.
 
 
 
 0.842
AHC14478.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 
 0.839
AHC15833.1
Sigma-54 dependent DNA-binding response regulator.
 
 0.835
AHC14333.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.833
AHC16631.1
Nitrogen regulation protein NtrX.
 
 0.829
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.