Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14377.1Indolepyruvate oxidoreductase subunit IorA. (767 aa)    
Predicted Functional Partners:
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.995
AHC16147.1
2-oxoglutarate oxidoreductase, beta subunit.
 
 
 0.927
AHC13839.1
2-oxoglutarate oxidoreductase, beta subunit.
 
 
 0.925
AHC16146.1
2-oxoglutarate oxidoreductase, alpha subunit.
  
 
 0.923
AHC13838.1
2-oxoglutarate oxidoreductase, alpha subunit.
 
 
 0.919
AHC13718.1
Periplasmic [Fe] hydrogenase large subunit.
  
 
 0.870
AHC14376.1
Phosphotransbutyrylase.
     
 0.834
AHC16225.1
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.822
buk-2
Butyrate kinase; Belongs to the acetokinase family.
     
 0.814
AHC15328.1
2,4-dienoyl-CoA reductase [NADPH].
  
 
 0.807
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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