Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC14381.1Hypothetical protein. (541 aa)    
Predicted Functional Partners:
AHC14380.1
Serine/threonine protein kinase.
 
    
0.841
AHC15750.1
Hypothetical protein.
 
 
 
 0.820
AHC16382.1
Hypothetical protein.
   
 
 0.645
AHC15332.1
Hypothetical protein.
 
 
 0.509
rnfA
Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
  
    0.508
AHC16050.1
Hypothetical protein.
 
 
 0.483
AHC14275.1
Serine/threonine protein kinase PrkC, regulator of stationary phase.
 
 
 0.467
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
  
 0.451
AHC16471.1
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
  
  
 0.439
AHC15719.1
Adenylate cyclase.
 
   
 0.438
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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