STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14404.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
AHC15498.1
Hypothetical protein.
 
    0.765
AHC16453.1
Hypothetical protein.
  
   
 0.746
AHC16454.1
Hypothetical protein.
  
   
 0.650
AHC13872.1
Hypothetical protein.
 
 
   0.640
AHC14737.1
Pheromone cAD1 precursor lipoprotein Cad.
  
     0.583
AHC15434.1
Mobile element protein.
  
     0.576
AHC14403.1
Putative alpha-dextrin endo-1, 6-alpha-glucosidase.
       0.568
AHC13823.1
Hypothetical protein.
  
    0.564
AHC15435.1
Hypothetical protein.
 
     0.548
AHC14588.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.526
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.