STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14426.1Transcriptional regulator, AsnC family. (147 aa)    
Predicted Functional Partners:
AHC14427.1
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
     
 0.820
AHC14428.1
2-amino-4-ketopentanoate thiolase, beta subunit.
     
 0.610
AHC14429.1
2-amino-4-ketopentanoate thiolase, alpha subunit.
       0.566
AHC14425.1
Isoaspartyl dipeptidase, Asp-X dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.
       0.535
AHC14828.1
Glutamate synthase [NADPH] large chain.
     
 0.515
AHC15655.1
Proline dehydrogenase(Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
  
 0.460
AHC14378.1
Transcriptional regulator, AsnC family.
  
     0.444
arcA
Arginine deiminase.
       0.402
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.