STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14464.1Xanthine dehydrogenase iron-sulfur subunit. (164 aa)    
Predicted Functional Partners:
AHC14465.1
Xanthine dehydrogenase, molybdenum binding subunit.
 
 
 0.997
AHC14463.1
Hypothetical protein.
 
 
 0.991
AHC14466.1
Putative aminotransferase, DegT family; Belongs to the DegT/DnrJ/EryC1 family.
       0.809
AHC14467.1
UDP-N-acetylglucosamine 4,6-dehydratase.
       0.808
AHC14462.1
DNA polymerase III alpha subunit.
       0.753
AHC14458.1
ATP phosphoribosyltransferase regulatory subunit.
 
     0.747
AHC14460.1
ATP-dependent DNA helicase RecG.
       0.739
AHC14459.1
16S ribosomal RNA (guanine(966)-N(2))-methyltransferase.
       0.736
AHC14461.1
Membrane protein, putative.
       0.729
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.722
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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