STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14486.1(GlcNAc)2 ABC transporter, ATP-binding component 1; Belongs to the ABC transporter superfamily. (323 aa)    
Predicted Functional Partners:
AHC14485.1
(GlcNAc)2 ABC transporter, permease component 2.
  
 0.997
AHC15827.1
Dipeptide transport system permease protein DppC.
  
 0.987
AHC16399.1
Oligopeptide transport system permease protein OppC.
  
 0.987
AHC14484.1
(GlcNAc)2 ABC transporter, permease component 1.
 
 0.974
AHC14483.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
  
 0.915
AHC16353.1
Taurine transport ATP-binding protein TauB.
 
    
0.906
AHC14040.1
ATPase component of energizing module of ECF transporter.
 
    
0.901
AHC14129.1
Oligopeptide transport system permease protein OppB.
 
 0.892
AHC13653.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.889
AHC16400.1
Oligopeptide transport system permease protein OppB.
 
 0.884
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.