Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14486.1(GlcNAc)2 ABC transporter, ATP-binding component 1; Belongs to the ABC transporter superfamily. (323 aa)    
Predicted Functional Partners:
AHC14485.1
(GlcNAc)2 ABC transporter, permease component 2.
 
 0.998
AHC15827.1
Dipeptide transport system permease protein DppC.
 
 0.990
AHC16399.1
Oligopeptide transport system permease protein OppC.
 
 0.989
AHC14484.1
(GlcNAc)2 ABC transporter, permease component 1.
 
 
 0.977
AHC14483.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
 
 0.927
AHC14129.1
Oligopeptide transport system permease protein OppB.
 
 0.905
AHC16353.1
Taurine transport ATP-binding protein TauB.
 
    
0.905
AHC16276.1
Hypothetical protein.
 
 
 0.901
AHC14040.1
ATPase component of energizing module of ECF transporter.
 
    
0.900
AHC15831.1
Dipeptide transport system permease protein DppB.
 
 0.900
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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