Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC14612.1Hypothetical protein. (603 aa)    
Predicted Functional Partners:
AHC14613.1
Cell division protein FtsI (Peptidoglycan synthetase).
       0.818
AHC15578.1
N-acetylneuraminate synthase.
 
   
 0.761
AHC14581.1
Flagellar assembly protein FliH.
  
     0.748
AHC14595.1
Flagellar biosynthesis protein FliZ.
  
     0.702
AHC14804.1
TolA protein.
  
     0.701
AHC14194.1
Hypothetical protein.
  
 
   0.700
AHC14630.1
Flagellar hook-associated protein FlgL.
 
 
 0.700
AHC13590.1
Hypothetical protein.
  
     0.681
AHC13698.1
TPR domain protein, putative component of TonB system.
 
     0.677
AHC14787.1
Hypothetical protein.
  
     0.663
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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