Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC14637.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
AHC14636.1
Hypothetical protein.
       0.814
AHC14641.1
Flagellin protein FlaA; Component of the core of the flagella. Belongs to the bacterial flagellin family.
   
   0.719
AHC14635.1
Hypothetical protein.
       0.679
AHC14638.1
Hypothetical protein.
       0.671
AHC14639.1
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.647
AHC14634.1
ATPase YjeE, predicted to have essential role in cell wall biosynthesis.
       0.625
AHC14633.1
TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA.
       0.558
AHC14640.1
Hypothetical protein.
       0.445
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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