STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14682.1Rubredoxin; Belongs to the rubredoxin family. (109 aa)    
Predicted Functional Partners:
AHC14681.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.791
AHC14683.1
PQQ-dependent oxidoreductase, gdhB family.
       0.746
AHC15113.1
Superoxide reductase.
  
  
 0.720
AHC15793.1
Flavoprotein.
 
  
 0.586
AHC14219.1
Putative CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.516
AHC15561.1
Ferritin; Iron-storage protein.
  
  
 0.454
AHC14680.1
Hypothetical protein.
       0.427
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.422
AHC15648.1
Hypothetical protein.
  
  
 0.406
AHC16346.1
Peroxide stress regulator, Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.406
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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