STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14690.1Phosphate regulon sensor protein PhoR (SphS). (396 aa)    
Predicted Functional Partners:
AHC14333.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.962
AHC14332.1
Phosphate regulon sensor protein PhoR (SphS).
  
  
  0.950
AHC15332.1
Hypothetical protein.
 
 
 0.847
AHC15617.1
Response regulatory protein.
  
 
 0.719
AHC16050.1
Hypothetical protein.
  
 
 0.693
AHC15333.1
Hypothetical protein.
  
 
 0.675
AHC16393.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.637
AHC15910.1
Chemotaxis protein methyltransferase CheR.
   
 
 0.560
AHC13471.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.544
AHC14691.1
Hypothetical protein.
       0.532
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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