STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14768.1Signal peptidase-like protein. (314 aa)    
Predicted Functional Partners:
rny
Hydrolase (HAD superfamily); Endoribonuclease that initiates mRNA decay.
 
  
 0.872
AHC14588.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.705
AHC14641.1
Flagellin protein FlaA; Component of the core of the flagella. Belongs to the bacterial flagellin family.
    
   0.705
AHC16642.1
Chemotaxis protein methyltransferase CheR.
    
   0.705
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
      0.701
AHC14767.1
DUF327 domain-containing protein.
  
  
 0.667
AHC14577.1
Flagellar hook-basal body complex protein FliE.
   
   0.622
AHC14817.1
Flagellar protein FlgJ (peptidoglycan hydrolase).
    
   0.605
AHC15623.1
Dihydroorotate dehydrogenase electron transfer subunit.
 
    0.593
AHC14766.1
Hypothetical protein.
     
 0.584
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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