Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC14770.1ABC transporter, ATP-binding protein. (578 aa)    
Predicted Functional Partners:
AHC14769.1
Hypothetical protein.
 
  
 
0.982
phnC-2
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.899
AHC14131.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
     
0.893
AHC13753.1
ABC transporter, ATP-binding protein.
    
0.819
AHC13653.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   
0.638
AHC14771.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
 
 0.591
AHC13572.1
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.581
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.486
AHC13668.1
Histone deacetylase family protein.
   
 0.469
AHC16760.1
Putative amino-acid ABC transporter ATP-binding protein y4tH.
     
0.425
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.