Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14793.1Response regulator/sensory box/HDIG domain protein. (387 aa)    
Predicted Functional Partners:
AHC15964.1
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
 
 
 0.706
AHC16043.1
Hypothetical protein.
 
 
 0.676
AHC13568.1
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
  
 
 0.674
AHC16725.1
Sensory box/GGDEF family protein.
 
 
 0.648
AHC15486.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.645
AHC13905.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.640
AHC16443.1
Hypothetical protein.
 
 
 0.630
AHC15104.1
Hypothetical protein.
  
 
 0.610
AHC15727.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.609
AHC14792.1
Uridine kinase.
       0.608
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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